NMR High Pressure Probes, Samples, and other details
| Home built high pressure NMR probe @ 400.13 MHZ proton observe frequency |
| Description | Pressure Range | Temperature range | Sample volume
|
| 1H{15N13C} w/ 2H lock | 1 bar to 4.2 kbar | 5 to 45 C | 400 to 800 microliters |
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| High Presssure probe | |
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| Berylium Copper Pressure Chamber, expanded view |
ZIRCONIUM OXIDE NMR SAMPLE TUBES
High pressure NMR sample tubes for studies of proteins in reverse micells.
 |
8mm high pressure NMR sample tube |
 |
5mm high pressure NMR sample tube |
| Pressurizing apparatus to 60,000 psi (4.2 kbar):
| | Applied Pressure Products (APP) Windows 98 computer controlled pump.
|
| Manual pump High Pressure Products 10 ml maximum volume.
|
| Bomb for hydrogen exchange studies and high pressure component testing, maximum volume 50 ml.
See Appendix II for charging procedure. |
"SAFETY ISSUES OF HIGH PRESSURE NMR"
!SAFETY FIRST!
"THE MAIN POINT TO BE EMPHASIZED IS TO FIND ASSISTANCE FROM A PERSON WHO IS HIGHLY EXPERIENCED
IN THE PROBLEMS OF SAFETY AT HIGH PRESSURE".
There are three main hazards to personnel (and equipment) doing high pressure NMR work.
In order to do this type of work safely some suggestions are included herein. THE MAIN HAZARDS ARE AS FOLLOWS:
HAZARDS ASSOCIATED WITH THE MAGNETIC FIELD OF 9.4 TESLA:
- MAGNETIC TOOLS:
Ferromagnetic tools (primarily wrenches which are used to tighten the high pressure driving nuts) can be captured by the magnetic field (these magnetic objects can injure personnel if they are caught between the magnet and the object or can cause the magnet to quench - lose vacuum in the dewar - then helium boiloff soars and complete loss of liquid helium coolant results). The solution to this problem is to use non-magnetic tools made of berylium copper, vanadium, titanium, or ampco alloy if possible but these materials are not always available for the tools of interest. Therefore magnetic tools must be used with caution to avoid capture by the magnet. Incidentally stainless steel tools are not necessarily non-magnetic and should be checked beforehand.
- PRESSURIZING APPARATUS:
The high pressure generating apparatus includes ferromagnetic materials as well so it
must be secured either to the wall or the floor to avoid capture by the magnet and must be an adequate distance from the magnet so that the magnetic field homogeneity is unaffected.
HAZARDS ASSOCIATED WITH HIGH PRESSURE TRANSMITTING FLUIDS:
- LIQUIDS:
Even though most of our our experiments are done with low compressibilty liquids (hence fairly low stored energy) fairly dangerous situations can develop such as ejection of electrical feedthroughs at high velocity.
If allowed to escape the high pressure liquid also can penetrate the eyes or skin and make wounds which heal only with difficulty - especially with liquids which may be poisonous. One especially should wear eye protection in the form of safety glasses.
- GASES:
The use of gases present a more difficult problem since a large amount of stored
energy will be involved when the system is pressurized. Some work with gases may be
reasonable with our present apparatus. These would include low pressure gases such as
carbon dioxide and nitrogen.
HAZARDS ASSOCIATED WITH MATERIALS TOXICITY:
- PRESSURISING FLUIDS:
Liquids: Carbon Disulfide-(CS2) forms a highly toxic vapor and is potentially toxic by absorption through the skin. Becaues of these problems we have dropped the use of this iquid in favor of the more inert electronic cleaning solvent-fluroinert.
- Gases:
Carbon dioxide and nitrogen are fairly innocuous except for asphyxiation problems
in high concentration.
Nitrous oxide
- PROBE MATERIALS: Berylium Copper BeCU:
Potentially toxic, basically because of the 1-2 % of beryllium alloyed with the copper.
- Toxic by breathing dust, especially during grinding of parts.
- potentially by ingestion of the solid particles.
- and by absorption through the skin, i.e. wash hands after handling probe parts. Be is known to form wounds that will not heal. Because of this all handling with rubber gloves is recommended. Because of the unique low diamagnetic susceptibilty properties of this material we have found it irreplaceable by anyother known intermetallic alloy for high resolution high pressure NMR.
Titanium: It may explosively react with oxygen, especially under pressure.
Conclusion regarding safety aspects of high pressure NMR studies
:
Our experience regarding high pressure safety presently consists of pressures up to 4.2 kbar and near term will include NMR studies up to 4.2 kbar. No work is envisaged beyond this pressure because of the stored energyinvolved, the increased complexity of the pressurizing apparatus, and the fact that a large number of interestingproteins denature below this pressure. The overall conclusion is that with the above precautions in mind work canbe done fairly routinely and safely to these pressures.
Manual for operation Procedure for the high pressure NMR apparatus:
High Pressure NMR Probe installation:
It is important to follow the instructions below precisely in order to obtain satisfactory results from the high pressure NMR probes. In order to reduce exposure to beryllium and fluorinert these procedures should bedone using vinyl gloves, these seem to be stronger than latex ones.
Remove the normal DMX400 NMR probe in use from the magnet as discussed in the probe section instructions. Put the probe in the ring stand holder with the probe bottom extensions sitting on the ring stand surface. (Do not sit the probeon the capacitor tuning wands as this will ruin the capacitors and require much labor for their replacement).
Remove the pressure screw and upper plug from the top of the probe. Do this by first loosening by use of two(2 open end wrenches (1" non-magnetic and 1.5" magnetic(careful with this one)) by turning opposite from one another. The pressure screw must !!never!! be tightened or loosened by holding the probe body as this will destroy the probe electronics as the pressure cell is not well connected to the probe cover.Prepare the NMR sample in a custom medium wall sample tube from Wilmad of ID 4.2 mm and of length 5.9 mm and flat bottom.
Fill the sample tube using a glass pipette leaving about 1 inch space empty at the top. Next push the pressure transmitting piston with two o-rings into the sample tube while at the time turning the piston. This dual motion protects the o-rings from disintegration.
Push the piston in leaving at least 1/4" open space at the top. At any rate try to remove all the air bubbles. Screw in the piston screw and tighten with a small screwdriver.
Next put the NMR sample in the high pressure probe upside down and while slowly rotating it, push it down flush with the upper c-seal surface. Do not force the sample as this can destroy the proton coil inside the probe.
Add sufficient fluorinert using a glass pipette to cover the NMR sample tube-again flush to the c-seal. Do not put in excess as this liquid is fairly expensive, $100 per bottle. The liquid should not leak out the bottom if the bottom pressure connection was kept properly closed as below.
Now screw down the top pressure plug and tighten as above.
Put the high pressure NMR probe into the magnet. Turn the lever to lock the probe in place.
Connect the one pressure lead and tighten with non-magnetic wrenches. In order to minimize liquid loss and contamination all pressure connections should be tightly covered except during installation. All pressure tubes are kept full of liquid at all times so that there should be no air in the system.
Tune and match probe as a normal proton NMR probe. The basic difference is that there are two tuning wands for protons. One side is tuned for symmetry. I'm not sure what this means but I've found that when one capacitor is flaky then the other may be used. One can also tune the lock channel from the probe bottom. This is the wand with no label. There are two unused 15N wands as well.
To run the pressure apparatus in the cabinet the electrical power must be on. Presssure is controlled as per the APP manual in the DMX-400 room.
To set the probe temperature use the refrigerated bath in the cabinet. First though the tubing should be connected to the probe. The probe temperature may be monitored from the RKC unit.
The high pressure pump is controlled by the Automated Pressure Products (APP) control system from the PC on the top of the imaging gradient console. The APP manual is in the DMX-400 room with the rest of the spectrometer manuals.
Water/Ice Phase Diagram
REFERENCES
- Water phase diagram: Any old undergrad PChem book! Thanks to Ken Prehoda for supplying the water/ice phase diagram graphics file.
-
A fairly complete discussion of high pressure safety issues may be found in the reference:
Experimental Techniques in High Pressure Research
W.F. Sherman, and A.A. Stadtmuller
Available in the University of Wisconsin-Madison Physics library
- User's Manual of Version 5.0, Automated Pressure Control System
- Ken Prehoda Ph.D. Thesis, Dept. of Biochemistry, University of Wisconsin-Madison, 1997.
- E.S.Mooberry, K. Prehoda, J.L. Markley, poster, 37th ENC, Asilomar, CA, 1996.
- E.S.Mooberry, K. Prehoda, J.L. Markley, poster, 38th ENC, Orlando, FL, 1997.
- Order NMR tube from Wilmad Glass Co., 40 Oak Rd, Buena, NJ, part # P-4.20m-0-0-5.9cm-FB, Quote #7341. Be sure to refer to the quote number. Sonja phone extension 672 @ 1-800-220-5171.
- Footnote: Ice Nine is a figment of the imagination of the late science fiction writer- Issac Asimov.
Links
- The Common Gateway Interface
- AAAAA K-Style Advanced Ceramics Co., Ltd.- Zirconium Oxide, Zirconia, Zirconia, ZrO2, Ceramic, all mean the same thing
- NMR-003: Pressure Performance of NMR & EPR Sample Tubes
- Applied Ceramics
- AREMCO
- Aremco Products
- Advanced Ceramic Technology
- Borges Technical Ceramics
- NMR-003: Pressure Performance of NMR & EPR Sample Tubes
- Brush Wellman -- HomePage
- Brush Wellman -- Customer Technical Service
- okeefe pg 1
- National Institute of Standards and Technology - working with industry to develop apply technology, measurements, and standards
- Ceramics and Industrial Minerals
- Ceramics and Industrial Minerals Search Results
- Directory of Advanced Ceramic Component Manufacturers
- Data Sheet A17
- B70655 Jul98 PRO - Jonas et al. High Resolution, High Pressure NMR Studies of Proteins
- NIST Structural Ceramics Database
- zirconia (zirconium oxide) and partially stabilized zirconia
Appendix 1
Pressure calibration chart by Ed Mooberry and Ken Prehoda - comparison of the Advanced Pressure Products
electronic and Heise mechanical pressure gauges. This calibration was done by use of the manual high pressure
pump set at 100 bar increments and then reading the electronic gauge output from the APP computer program.
1 bar=14.50 psi
-----------------------------
mech. electronic %diff
bar psi bar
-----------------------------
100 1560 108 8%
200 3038 210 5
300 4520 312 4
400 5990 413 3
500 7410 511 2
600 8890 613 2
700 10320 712 1.7
800 11750 810 1.3
900 13160 908 0.9
1000 14660 1011 1.1
1100 16100 1110 0.9
1200 17504 1207 0.6
1300 19000 1310 0.8
1400 20470 1412 0.9
1500 21890 1510 0.7
1600 23310 1608 0.5
1700 24764 1708 0.5
1800 26260 1811 0.6
1900 27640 1906 0.3
2000 29100 2007 0.4
2100 30510 2104 0.2
2200 31980 2206 0.3
2300 33400 2303 0.1
2400 34870 2405 0.2
2500 36330 2505 0.2
2600 37740 2603 0.1
2700 39160 2701 0.03
2800 40640 2803 0.1
2900 42100 2903 0.1
3000 43500 3000 0.00
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Appendix 2
Series "R" reactor from High Pressure Products closure assembly procedure: Following this procedure precisely is important for correct operation.- Place the buna rubber o-ring into the o-ring groove of the reactor body. Place metal back up ring directly on top of o-ring with flat surface down (in contact with o-ring). Lower cover into body of reactor. (*) Rotate Main Nut clockwise into reactor body until it firmly comes into contact with cover and pushes cover down into its most downward position. Rotate Main Nut back out (counterclockwise) a slight distance (approximately 10 to 15 degrees ). This last step is important and will insure easy removal of the closure after the reactor has been pressurized.
History
Summer: 5mm and 8mm tubes received. Upper fitting machined.
March 24, 1999: Purchase order in preparation.
Revised 09/27/02